Function reference • bcbioSingleCell

S4 classes

bcbioSingleCell-class: bcbio single-cell RNA-seq data set

bcbioSingleCell(): bcbio single-cell RNA-seq data set

`[`(<bcbioSingleCell>,<ANY>,<ANY>,<ANY>): Extract or replace parts of an object

show(): Show an object

updateObject(): Update object

Plots

plotReadsPerCell(): Plot read counts per cell

Example data

bcb: bcbio single-cell RNA-seq example data set

Reexports

reexports calculateMetrics filterCells plotBarcodeRanks plotCellCounts plotCountsPerCell plotCountsVsFeatures plotFeaturesPerCell plotMitoRatio plotNovelty plotQc: Objects exported from other packages