Skip to contents

All functions

AcidDevTools AcidDevTools-package
AcidDevTools
cd() clear() d() la()
Aliases
build()
Build source and binary packages
catVec()
Print (cat) a vector
check()
Check package
currentBiocVersion()
Current Bioconductor release version
drat()
Build packages and commit to drat repo
fibonacciSequence()
Fibonacci sequence
findAndReplace()
Find and replace in files across a directory
finder()
Open Finder to the current directory
getCurrentGitHubVersion()
Get current release version of package from GitHub
install()
Install packages from Bioconductor, CRAN, or a Git remote
installAcidverse()
Install Acid Genomics packages
installFromGitHub()
Install packages from GitHub
installRecommendedPackages()
Install recommended R packages
installedPackages()
Find installed packages
kill() killAll()
Kill R session
migrateRecommendedPackages()
Migrate recommended packages
packageDependencies()
Package dependencies
parseRd() RdTags()
Parse R documentation
pbcopy()
Copy to clipboard
pkgdownDeployToAWS()
Deploy a pkgdown website to AWS S3 bucket
printComment()
Print as comment
reexports BiocCheck package_coverage percent_coverage report build_vignettes document load_all run_examples lint lint_dir lint_package build_articles build_home build_news build_reference build_reference_index build_site rcmdcheck download_version install_bioc install_bitbucket install_deps install_git install_github install_gitlab install_url style_dir style_file style_pkg test_file use_data devinstall doc exit
Reexported functions
saveRdExamples()
Save R documentation examples
scriptPath()
Script path
acid_style()
Acid Genomics styler formatting theme
tabular()
R documentation table
test()
Execute test_that tests in a package
uninstall()
Uninstall a package
updateDeps()
Update outdated dependencies
updatePackages()
Update all installed packages
valid()
Validate installed package versions against correct versions
view2()
View object