Function reference
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assignAndSaveData()
- Assign and save data
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loadData()
- Load data
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loadDataAsName()
- Load data as name
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loadRemoteData()
- Load remote data
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saveData()
- Save data
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cacheUrl()
- Download and cache a file
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getJson()
- Get JSON from an API
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getUrlDirList()
- Get remote URL directory listing
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transmit()
- Transmit files from a remote FTP server
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as.DataFrame()
- Coerce object to S4 DataFrame
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as.data.frame()
- Coerce object to data.frame
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assignAndSaveData()
- Assign and save data
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atomize()
- Atomize
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decode()
- Decode data that uses run-length encoding
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droplevels2()
- Drop factor levels
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encode()
- Encode using run-length encoding
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factorize()
- Factorize
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fillLines()
- Fill delimited lines with NA values
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matchRownameColumn()
- Match row name column
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metadata2()
`metadata2<-`()
- Metadata
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naStrings
- NA strings
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removeNa()
- Remove rows and columns containing only NA values
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sanitizeNa()
- Sanitize NA values
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sanitizePercent()
- Sanitize percentage
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unfactorize()
- Unfactorize
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PipetteFile-class
PipetteDelimFile-class
PipetteExcelFile-class
PipetteLinesFile-class
PipetteRioFile-class
PipetteRtracklayerFile-class
PipetteBamFile-class
PipetteBcfFile-class
PipetteBcbioCountsFile-class
PipetteCramFile-class
PipetteCsvFile-class
PipetteFastaFile-class
PipetteFastqFile-class
PipetteGafFile-class
PipetteGctFile-class
PipetteGmtFile-class
PipetteGmxFile-class
PipetteGrpFile-class
PipetteJsonFile-class
PipetteMafFile-class
PipetteMtxFile-class
PipetteOboFile-class
PipettePzfxFile-class
PipetteRDataFile-class
PipetteSamFile-class
PipetteRdsFile-class
PipetteTableFile-class
PipetteTsvFile-class
PipetteVcfFile-class
PipetteYamlFile-class
- File extension classes