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List containing related DESeqResults objects

Source: R/AllGenerics.R, R/DESeqResultsList-methods.R
DESeqResultsList.Rd

List containing related DESeqResults objects

Usage

DESeqResultsList(object, ...)

# S4 method for class 'DESeqAnalysis'
DESeqResultsList(object, lfcShrink = NULL, quiet = FALSE)

# S4 method for class 'DESeqAnalysisList'
DESeqResultsList(object, ...)

# S4 method for class 'SimpleList'
DESeqResultsList(object)

# S4 method for class 'list'
DESeqResultsList(object)

# S4 method for class 'missing'
DESeqResultsList(object)

Arguments

object

Object.

...

Additional arguments.

lfcShrink

logical(1) or NULL. Use shrunken log2 fold change (LFC) values. If NULL, inherits value defined in lfcShrink().

quiet

logical(1). Perform command quietly, suppressing messages.

Value

DESeqResultsList.

Note

Updated 2021-03-15.

Examples

data(deseq)
x <- DESeqResultsList(deseq)
#> ℹ Returning shrunken results from `lfcShrink` slot.
print(names(x))
#> [1] "condition_B_vs_A" "treatment_D_vs_C"