Shrink log2 fold changes — lfcShrink • DESeqAnalysis

Shrink log2 fold changes

Usage

lfcShrink(object, ...)
lfcShrink(object, ...) <- value

# S4 method for class 'DESeqAnalysis'
lfcShrink(object)

# S4 method for class 'DESeqAnalysisList'
lfcShrink(object)

# S4 method for class 'DESeqDataSet'
lfcShrink(object, ...)

# S4 method for class 'DESeqAnalysis,logical'
lfcShrink(object) <- value

# S4 method for class 'DESeqAnalysisList,logical'
lfcShrink(object) <- value

Arguments

object: Object.
...: Additional arguments.
value: Value to assign.

Value

Varies, depending on object class.

Note

Updated 2021-06-28.

See also

DESeq2::lfcShrink().

Examples

data(deseq)

## DESeqAnalysis ====
lfcShrink(deseq)
#> [1] TRUE