Summarized experiment

Example SummarizedExperiment containing transcript-level RNA-seq data.

Usage

data(SummarizedExperiment_transcripts)

Format

An object of class SummarizedExperiment with 6 rows and 4 columns.

Value

SummarizedExperiment.

Note

Updated 2020-02-05.

Examples

if (requireNamespace("SummarizedExperiment", quietly = TRUE)) {
    data(SummarizedExperiment_transcripts)
    class(SummarizedExperiment_transcripts)
    print(SummarizedExperiment_transcripts)
}
#> class: SummarizedExperiment 
#> dim: 6 4 
#> metadata(0):
#> assays(1): counts
#> rownames(6): ENST00000494424.1 ENST00000496771.5 ... ENST00000371588.9
#>   ENST00000413082.1
#> rowData names(2): txId geneId
#> colnames(4): sample1 sample2 sample3 sample4
#> colData names(0):