S4 genomic ranges list

Example Bioconductor S4 GRangesList object.

Usage

data(GRangesList)

Format

An object of class CompressedGRangesList of length 3.

Value

GRangesList.

Note

Updated 2023-11-08.

Examples

if (requireNamespace("GenomicRanges", quietly = TRUE)) {
    data(GRangesList)
    class(GRangesList)
    is(GRangesList, "GRangesList")
    print(GRangesList)
}
#> GRangesList object of length 3:
#> [[1]]
#> GRanges object with 1 range and 2 metadata columns:
#>       seqnames    ranges strand |     score        gc
#>          <Rle> <IRanges>  <Rle> | <integer> <numeric>
#>   [1]     chr2       3-6      + |         5      0.45
#>   -------
#>   seqinfo: 2 sequences from an unspecified genome; no seqlengths
#> 
#> [[2]]
#> GRanges object with 2 ranges and 2 metadata columns:
#>       seqnames    ranges strand |     score        gc
#>          <Rle> <IRanges>  <Rle> | <integer> <numeric>
#>   [1]     chr1       7-9      + |         3       0.3
#>   [2]     chr1     13-15      - |         4       0.5
#>   -------
#>   seqinfo: 2 sequences from an unspecified genome; no seqlengths
#> 
#> [[3]]
#> GRanges object with 2 ranges and 2 metadata columns:
#>       seqnames    ranges strand |     score        gc
#>          <Rle> <IRanges>  <Rle> | <integer> <numeric>
#>   [1]     chr1       1-3      - |         6       0.4
#>   [2]     chr2       4-9      - |         2       0.1
#>   -------
#>   seqinfo: 2 sequences from an unspecified genome; no seqlengths
#>