EggNOG is a database of biological information hosted by the EMBL. It is based on the original idea of COGs (clusters of orthologous groups) and expands that idea to non-supervised orthologous groups constructed from numerous organisms. eggNOG stands for evolutionary genealogy of genes: Non-supervised Orthologous Groups.
Usage
EggNOG(release = c("5.0", "4.5", "4.1"))Examples
object <- EggNOG()
#> → Importing /Users/mike/.cache/R/EggNOG/BiocFileCache/186306c872267_1_annotations.tsv.gz using base::`read.table()`.
print(object)
#> EggNOG 0.3.0 with 25:295028 rows and 3:3 columns
#> ids(295028): 28H50 28H51 ... arCOG15273 arCOG15274
#> categories(25): Amino acid transport and metabolism Carbohydrate transport and metabolism ... Transcription Translation, ribosomal structure and biogenesis