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Principal component analysis plot

Usage

plotPCA(object, ...)

# S4 method for DESeqAnalysis
plotPCA(object, ...)

Arguments

object

Object.

...

Additional arguments.

Value

ggplot.

Details

Passes to SummarizedExperiment defined in AcidPlots package.

Functions

  • plotPCA,DESeqAnalysis-method: Extracts DESeqTransform, converts to RangedSummarizedExperiment, and passes to method defined in AcidPlots.

Note

Updated 2022-03-08.

Examples

data(deseq)

## DESeqAnalysis ====
plotPCA(deseq)