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Log2 fold change threshold

Source: R/AllGenerics.R, R/lfcThreshold-methods.R
lfcThreshold.Rd

Log2 fold change threshold

Usage

lfcThreshold(object, ...)
lfcThreshold(object, ...) <- value

# S4 method for DESeqAnalysis
lfcThreshold(object)

# S4 method for DESeqAnalysisList
lfcThreshold(object)

# S4 method for DESeqResults
lfcThreshold(object)

# S4 method for DESeqResultsList
lfcThreshold(object)

# S4 method for DESeqAnalysis,numeric
lfcThreshold(object) <- value

# S4 method for DESeqAnalysis,`NULL`
lfcThreshold(object) <- value

# S4 method for DESeqAnalysisList,numeric
lfcThreshold(object) <- value

# S4 method for DESeqAnalysisList,`NULL`
lfcThreshold(object) <- value

# S4 method for DESeqResults,numeric
lfcThreshold(object) <- value

# S4 method for DESeqResultsList,numeric
lfcThreshold(object) <- value

Arguments

object

Object.

value

Value to assign.

...

Additional arguments.

Value

numeric(1).

Details

Assumes 0 by default if unset.

Note

Updated 2021-03-12.

Examples

data(deseq)

## DESeqAnalysis ====
lfcThreshold(deseq) <- 0.2
lfcThreshold(deseq)
#> [1] 0.2