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CCLECopyNumberData-class
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CCLE copy number data |
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CCLECopyNumberData()
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Import CCLE copy number data |
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CCLEExpressionData-class
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CCLE expression data |
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CCLEExpressionData()
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Import CCLE expression data |
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CCLEFusionData-class
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CCLE fusion data |
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CCLEFusionData()
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Import CCLE fusion data |
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CCLEMutationData-class
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CCLE mutation data |
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CCLEMutationData()
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Import CCLE mutation data |
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Codependencies-class
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Gene effect co-dependencies |
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Codependencies()
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Import Co-dependency scores |
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GeneEffect-class
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Gene effect in cancer cell lines |
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GeneEffect()
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Gene effect in cancer cell lines |
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crispr
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CRISPR example data set |
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plotGeneEffect()
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Plot gene effect |
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plotGeneEffectVsExpression()
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Plot gene effect vs. expression |
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plotTopGeneEffectPerCell()
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Plot top gene effect (dependencies) per cell |
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plotTopGeneEffectPerGroup()
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Plot top gene effect per group of interest |
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rnai
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RNAi example data set |
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show(<CCLEMutationData>) show(<GeneEffect>)
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Show an object |