CRISPR example data set

data(crispr)

Format

An object of class GeneEffect with 100 rows and 50 columns.

Value

DESeqAnalysis.

Note

Updated 2021-06-09.

Author

Michael Steinbaugh

Examples

data(crispr) print(crispr)
#> GeneEffect 0.2.0 of length 100 #> dataset: depmap_public_21q2 #> libraryType: crispr #> project: combined #> scoringMethod: chronos #> date: 2021-07-19 #> releaseDate: 2021-05 #> class: SummarizedExperiment #> dim: 100 50 #> metadata(16): commonEssentials controlCommonEssentials ... wd yaml #> assays(2): effect probability #> rownames(100): A1BG_1 A1CF_29974 ... ABI2_10152 ABI3_51225 #> rowData names(13): chromosome dbXrefs ... typeOfGene xTaxId #> colnames(50): ACH_000001 ACH_000004 ... ACH_000094 ACH_000095 #> colData names(26): achillesNReplicates age ... subtype wtsiMasterCellId