Cell Ranger RNA-seq data set

Contains UMI droplet-based single-cell RNA-seq data.

Author

Michael Steinbaugh

Examples

showClass("CellRanger")
#> Class "CellRanger" [package "Chromium"]
#> 
#> Slots:
#>                                                                 
#> Name:           int_elementMetadata                  int_colData
#> Class:                    DataFrame                    DataFrame
#>                                                                 
#> Name:                  int_metadata                    rowRanges
#> Class:                         list GenomicRanges_OR_GRangesList
#>                                                                 
#> Name:                       colData                       assays
#> Class:                    DataFrame               Assays_OR_NULL
#>                                                                 
#> Name:                         NAMES              elementMetadata
#> Class:            character_OR_NULL                    DataFrame
#>                                    
#> Name:                      metadata
#> Class:                         list
#> 
#> Extends: 
#> Class "SingleCellExperiment", directly
#> Class "RangedSummarizedExperiment", by class "SingleCellExperiment", distance 2
#> Class "SummarizedExperiment", by class "SingleCellExperiment", distance 3
#> Class "RectangularData", by class "SingleCellExperiment", distance 4
#> Class "Vector", by class "SingleCellExperiment", distance 4
#> Class "Annotated", by class "SingleCellExperiment", distance 5
#> Class "vector_OR_Vector", by class "SingleCellExperiment", distance 5