Exclude problematic cells

Usage

excludeProblematicCells(object, ...)

# S4 method for Cellosaurus
excludeProblematicCells(object)

Arguments

object

Object.

...

Additional arguments.

Value

Modified object, with problematic cells excluded (removed).

Details

excludeProblematicCells filters based on "Problematic cell line" metadata in cell line comments. This also removes contaminated cell lines, and is more strict.

Note

Updated 2023-09-12.

See also

Examples

data(cello)

## Cellosaurus ====
object <- cello
print(dim(object))
#> [1] 10 36
object <- excludeProblematicCells(object)
print(dim(object))
#> [1]  9 36