Toolkit for performing queries on cBioPortal.
Installation
R method
if (!requireNamespace("BiocManager", quietly = TRUE)) {
install.packages("BiocManager")
}
install.packages(
pkgs = "cBioPortalAnalysis",
repos = c(
"https://r.acidgenomics.com",
BiocManager::repositories()
)
)
Details
Currently using cgdsr internally, but am evaluating the new cBioPortalData package for inclusion in a future release.