Organism

organism(object)

organism(object) <- value

# S4 method for matrix
organism(object)

# S4 method for Matrix
organism(object)

# S4 method for data.frame
organism(object)

# S4 method for Annotated
organism(object)

# S4 method for DataFrame
organism(object)

# S4 method for GRanges
organism(object)

# S4 method for Annotated
organism(object) <- value

Arguments

object

Object.

value

Value to assign.

Value

character(1). Latin organism name (e.g. Homo sapiens).

Note

Updated 2021-02-01.

See also

[detectOrganism()][.

Examples

## DataFrame ==== df <- DataFrame( "txId" = c( "ENST00000635602.1", "ENST00000635506.1" ), "geneId" = c( "ENSG00000283061.1", "ENSG00000283061.1" ), row.names = c( "ENST00000635602.1", "ENST00000635506.1" ) ) x <- organism(df) print(x)
#> [1] "Homo sapiens"