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Map GENCODE release to Ensembl

Source: R/mapGencodeToEnsembl.R
mapGencodeToEnsembl.Rd

Map GENCODE release to Ensembl

Usage

mapGencodeToEnsembl(release)

Arguments

release

integer(1) or character(1). Human (e.g. 42) or mouse (e.g. "M21") GENCODE release.

Value

integer(1). Ensembl release.

Note

Updated 2023-02-10.

See also

  • https://www.gencodegenes.org/human/releases.html

  • https://www.gencodegenes.org/mouse/releases.html

  • https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/_README.TXT

  • https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_mouse/_README.TXT

Examples

## Homo sapiens.
mapGencodeToEnsembl(42L)
#> [1] 108
## Mus musculus.
mapGencodeToEnsembl("M31")
#> [1] 108