Known cell markers

Objects must contain Ensembl gene identifiers in the geneId column. We must avoid any matching operations based on the gene names, since these change often and can mismatch easily.

Usage

KnownMarkers(markers, known, ...)

Arguments

markers

Object containing cell markers from differential expression analysis. (e.g. SeuratMarkers).

known

Object containing known cell-type-specific marker genes (e.g. CellTypeMarkers).

...

Additional arguments.

Value

KnownMarkers.

Examples

showMethods("KnownMarkers")
#> Function: KnownMarkers (package AcidGenerics)
#> <No methods>
#>