Convert sample identifiers to names

convertSampleIDsToNames(object, ...)

# S4 method for SummarizedExperiment
convertSampleIDsToNames(object)

Arguments

object

Object.

...

Additional arguments.

Value

Modified object of same class, with valid sample IDs remapped to human-readable sample names.

Note

Updated 2021-02-02.

Examples

data(RangedSummarizedExperiment, package = "AcidTest") ## SummarizedExperiment === object <- RangedSummarizedExperiment convertSampleIDsToNames(object)
#> ! Returning object with sample names unmodified.
#> class: RangedSummarizedExperiment #> dim: 500 12 #> metadata(3): version date interestingGroups #> assays(1): counts #> rownames(500): gene001 gene002 ... gene499 gene500 #> rowData names(9): broadClass description ... geneName seqCoordSystem #> colnames(12): sample01 sample02 ... sample11 sample12 #> colData names(1): condition