Version 0.6

AcidPlots 0.6.0 (2023-08-11)

Major changes:

• Now requiring R 4.3 / Bioconductor 3.17.
• Reworked internal code to use rlang pronouns (.data) instead of legacy syntactic sugar approach with !! and sym. Refer to rlang documentation for details on non-standard evaluation and tidy evaluation.

Minor changes:

• Updated ggplot2 deprecations related to recommendation of linewidth instead of size for line geoms.
• plotCountsPerCell: Hardened point mode for SCE objects that don’t contain precalculated nCount metadata in colData. Also improved error message when user attempts to plot point with a geom other than ecdf.
• plotCorrelation: Now using recommended after_stat instead of deprecated stat function for correlation calculations.

AcidPlots 0.6.1 (2023-08-17)

Major changes:

• All custom ggplot2 functions are now prefixed with acid_, for consistency.
• Simplified acid_coord_flip as acid_discrete_coord_flip. This no longer attempts to parse the gg object, and returns ggproto, so it can be chained in + operations.
• Renamed scale functions to fit ggplot2 snake_case conventions: autoContinuousColorScale to acid_scale_color_continuous; autoContinuousFillScale to acid_scale_fill_continuous; autoDiscreteColorScale to acid_scale_color_discrete; autoDiscreteFillScale to acid_scale_fill_discrete.

Minor changes:

• Removed usage of BiocParallel.