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AcidGenomes 0.9.0 (2026-09-20)

Bug fixes:

  • makeGRangesFromGff: Restore UCSC GTF import with current Bioconductor by using txdbmaker::makeTxDbFromGFF().
  • downloadUcscGenome: Continue downloading UCSC mm39 genome annotations when its retired transcriptome FASTA files are unavailable.

Testing:

  • Refresh RefSeq and UCSC longtest expectations for current upstream content.